[gmx-users] manually creating a topology file

Nishith Saurav Topno ntopno at bicpu.edu.in
Thu Mar 31 12:15:53 CEST 2011

Dear all,
I intend to run a simulation for a membrane protein. As per a tutorial, i
require a lipid bilayer and some (.itp) files for editing manually a toplogy
file for the lipid bilayer. Question is how do I choose the appropriate
lipid bilayer and its subsequent (.itp) file? Also, what are the required
necessary things to be edited. I intend to use teh OPLS-AA force field to
represent my protein

Nishith Saurav Topno
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20110331/43246881/attachment.html>

More information about the gromacs.org_gmx-users mailing list