[gmx-users] gromacs make error

Szilárd Páll szilard.pall at cbr.su.se
Tue May 10 19:15:13 CEST 2011

Just some hints:

- Does the target platform (32/64 bit) or the fftw libs and Gromacs
build match?

- Try to do a make clean first and (/or?) and reconfigure with
--enable-shared. Not sure that it will help, but I vaguely remember

- Try CMake.


On Tue, May 10, 2011 at 9:03 AM, Sajad Ahrari <sajadahrari at yahoo.com> wrote:
> dear users
> while installing gromacs and after running ./configure, i tried to run the
> "make" command. but soon i was faced with an error witch is typed below. it
> seems that fftw libraries are not found. i downloaded and installed
> fftw3.2.2 as mentioned in gromacs website. and put the extracted files of
> gromacs and fftw both in /user/local directory. how should i come along this
> problem?
> thanks for your help!
> sajad
> /user/local/lib/libfftw3f .a; could not read symbols; bad value
> collect2: ld returned 1 exit status
> make[3]: *** [libmd.la] error 1
> make[3]: leaving directory '/user/local/gromacs-4.5.4/src/mdlib'
> make[2]: *** [all-recursive] error 1
> make[2]: leaving directory '/user/local/gromacs-4.5.4/src/mdlib'
> make[1]: *** [all-recursive] error 2
> make[1]: leaving directory '/user/local/gromacs-4.5.4/src'
> make: *** [all-recursive] error 1
> --
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