[gmx-users] Continuing job in another machine
Kavyashree M
hmkvsri at gmail.com
Wed May 11 13:09:18 CEST 2011
Respected Sir,
So that number doesnt mean what it says!
Thanking you
With regards
kavya
On Wed, May 11, 2011 at 4:27 PM, Mark Abraham <mark.abraham at anu.edu.au>wrote:
>
>
> On 11/05/11, *Kavyashree M * <hmkvsri at gmail.com> wrote:
>
> Dear users,
>
> I was running an MD in a machine with 2 quad core processors
> using all 8 cores system cores, for some reasons I had to shift the
> job to another machine with 2 quad cores processors, identical OS
> and gromacs version using 8 cores. After I started runnning using check
> point
> file it said -
>
> " Build time mismatch,
> current program: Thu Jan 20 12:00:01 IST 2011
> checkpoint file: Thu Jan 20 11:57:38 IST 2011
>
> Build user mismatch,
> current program: kavya at alder
> checkpoint file: kavya at yamuna
>
> Gromacs binary or parallel settings not identical to previous run.
> Continuation is exact, but is not guaranteed to be binary identical."
>
> How does this effect the run and also it gave a warning saying
>
>
> See http://www.gromacs.org/Documentation/Terminology/Reproducibility.
> Under normal circumstances there is nothing of concern.
>
>
> "WARNING: This run will generate roughly 2054591408127343104 Mb of data" !!
>
> which generally used to be around 5GB!
>
> What is wrong here? Kindly reply.
>
>
> Some kind of integer datatype is different on the two machines, and some
> kind of overflow is happening in the estimation. Don't worry about it.
>
> Mark
> --
> gmx-users mailing list gmx-users at gromacs.org
> http://lists.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at
> http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
> Please don't post (un)subscribe requests to the list. Use the
> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20110511/bb99b71b/attachment.html>
More information about the gromacs.org_gmx-users
mailing list