[gmx-users] issue with newest version of martini model

Justin A. Lemkul jalemkul at vt.edu
Thu May 19 23:19:45 CEST 2011



jeremy adler wrote:
> I am getting ab error with the newest version of the martini model in 
> which seq2itp, atom2cg generate structures with a topology mismatch if 
> there are any alanines in the structure 9. mutating out the alanines 
> seems to resolve the problem? are there any bug fixes out there?
> 

You're better off contacting the MARTINI developers, since this is not actually 
a Gromacs problem.

-Justin

-- 
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Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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