[gmx-users] what's the philosophy of -ci option in "genbox"?

[牛继南]

Hi，gmx users:
Recently, I have a question——what's the philosophy of -ci option in "genbox"?
My understanding is that a molecule is randomly generated in the hole at first, then a new location around the molecule is generated according to  a random seed , then gmx checks whether solve or solute molecules will overlap, and so on. What is correct?


--

Sincerely yours 
Dr Ji-Nan Niu 
School of Materials Science and Engineering.
China University of Mining and Technology.
Jiangsu Province, XuZhou 221116
P. R. China
_____________________________________________________
Email: njn0516 at cumt.edu.cn Phone: +86-13852039305
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20110525/ed7bbf88/attachment.html>