[gmx-users] dipole moment

David van der Spoel spoel at xray.bmc.uu.se
Wed May 25 17:59:58 CEST 2011


On 2011-05-25 17.36, Nilesh Dhumal wrote:
> I want to see the change in dipole moment alond the simulation.
g_dipoles -h

>
>
> NIlesh
>
> On Wed, May 25, 2011 11:32 am, David van der Spoel wrote:
>> On 2011-05-25 17.14, Nilesh Dhumal wrote:
>>
>>> Hello,
>>>
>>>
>>> Can I calculate a dipole moment of a particular bond?
>>>
>> It is easier to do it manually. Otherwise g_dipoles with a suitable
>> index file would do it. The sum of charges has to be zero of course.
>>>
>>> I am using gromacs version 4.0.7.
>>>
>>>
>>> Thanks
>>>
>>>
>>> Nilesh
>>>
>>>
>>>
>>>
>>
>>
>> --
>> David van der Spoel, Ph.D., Professor of Biology
>> Dept. of Cell&  Molec. Biol., Uppsala University.
>> Box 596, 75124 Uppsala, Sweden. Phone:	+46184714205.
>> spoel at xray.bmc.uu.se    http://folding.bmc.uu.se --
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>
>


-- 
David van der Spoel, Ph.D., Professor of Biology
Dept. of Cell & Molec. Biol., Uppsala University.
Box 596, 75124 Uppsala, Sweden. Phone:	+46184714205.
spoel at xray.bmc.uu.se    http://folding.bmc.uu.se



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