[gmx-users] solvent implicit error
cesteban at unsl.edu.ar
cesteban at unsl.edu.ar
Thu May 26 19:14:28 CEST 2011
Hi All
I am trying analyze the dynamics of polymer of GlcN residues using ffG53a6
force field. I included in toplogy file the follow sentence:
;Include GB Parameters
[ implicit_genborn_params ]
#include "mypath/MYgbsa.itp"
The MYgbsa.itp is :
; atype sar st pi gbr hct
CH1 0.18 1 1.276 0.190 0.72 ; C
CH2 0.18 1 1.276 0.190 0.72 ; C
H 0.1 1 1 0.115 0.85 ; H
N 0.155 1 1.028 0.17063 0.79 ; N
OA 0.15 1 0.926 0.148 0.85 ; O
When I run grompp I have this error:
-------------------------------------------------------
Program grompp, VERSION 4.5.3
Source code file: topio.c, line: 660
Fatal error:
Syntax error - File test.top, line 12325
Last line read:
'[ implicit_genborn_params ]'
Invalid order for directive implicit_genborn_params
For more information and tips for troubleshooting, please check the GROMACS
website at http://www.gromacs.org/Documentation/Errors
-------------------------------------------------------
Any help would be appreciated
Carmen
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