[gmx-users] g_hbond -hbn

Yao Yao yao0o at ymail.com
Tue Nov 8 02:32:57 CET 2011


Hi Gmxers,

I used g_hbond -n protein.ndx -hbn output.xvg 

to get the index of all the atoms forming H-bond with the protein, 

but since H-Bonds should be dynamic as time evolves, I should see changing number of HBonds in the output.xvg which I have not seen yet.
Kinda confused.

Thanks,

Yao  
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