[gmx-users] what's the meaning of g_msd's -trestart

[Justin A. Lemkul]

杜波 wrote:
> dear teacher,
> i read the groace_manual-4.5.4:
> i found "The time between the reference points for the MSD calculation 
> is set with -trestart."
> and "the defaut is 10ps."
> do it computer the "msd" like this :
> 0ns compared with "-beginfit to -endfit "
> 10ns compared with "-beginfit to -endfit "
> 20ns compared with "-beginfit to -endfit "
> 30ns compared with "-beginfit to -endfit "
> ....

Please consult the following:

http://lists.gromacs.org/pipermail/gmx-users/2010-July/052512.html

-Justin

-- 
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Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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