[gmx-users] Extract van der waals surface atoms coordinates

Alex Jemulin alexbioinfo at yahoo.com
Fri Nov 18 16:55:22 CET 2011


Dear All
 
How can I extract van der waals surface atoms coordinates from MD Trajectory and write them to a file?
Is it possible with gromacs? And with other tools?
Any suggestion?
 
Thanks in advance
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