[gmx-users] Fwd: afm simulation

[swati patel]

---------- Forwarded message ----------
From: swati patel <swatipatel088 at gmail.com>
Date: Sat, Nov 19, 2011 at 3:18 PM
Subject: afm simulation
To: Discussion list for GROMACS users <gmx-users at gromacs.org>


Hello Justin,

I am following your tutorial on umbrella sampling.My project is on afm
simulation of streptavidin-biotin complex.Till index.idx i ve created all
my files.But as per your tutorial you have discussed of frames extraction
and configurations.Since i am dealing with pull afm,so do I also need to
extract frames and generate configuration ??

Please tell me about the next step after doing npt equlibration and
generating index.idx files?

Thanx
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