[gmx-users] NVT simulation
Justin A. Lemkul
jalemkul at vt.edu
Sat Nov 19 18:53:05 CET 2011
swati patel wrote:
> hello Justin,
>
> I am running NVT simulation for 20,000 steps.From last 40 minutes,It is
> showing on the screen NOTE: Turning on dynamic load balancing and no
> further steps are shown.Do generally NVT simulation takes a good amount
> of time or am I making a mistake somwhere in the parameter file?
>
I have no idea how long it should take, and the note does not indicate any
problem. The time for completion will depend upon a host of factors, not the
least of which are the size of the system, number of available processors,
neighbor searching frequency, and electrostatics method.
-Justin
--
========================================
Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
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