[gmx-users] glutamic acid protonation
quantrum75 at yahoo.com
Tue Nov 22 05:32:03 CET 2011
I am having a sudden brainfart here and
apologize for the silliness of the question. If the first amino acid of
your protein is a Glutamic acid, what would you set the protonation
status using the -ter option of pdb2gmx? The protein is in 0.1 molar
NaCl solution. I know it is basic Biochem, but I am a bit stumped here.
Thanks for the favor of a reply.
-------------- next part --------------
An HTML attachment was scrubbed...
More information about the gromacs.org_gmx-users