[gmx-users] (no subject)

Justin A. Lemkul jalemkul at vt.edu
Fri Sep 9 23:02:40 CEST 2011

Алексей Раевский wrote:
> Hi. I've look through the manual and didn't find an answer on my 
> question: i've got a trajectory and i want to convert it in *.pdb with 
> such parameters of index file [all atoms within a sphere with a chosen 
> radius around selected atom]. What can i do? Thank you

Use g_select to generate the index group and trjconv to write the file in the 
format (and with the contents) that you want.



Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


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