[gmx-users] How do I examine the results didn't write issue
lina.lastname at gmail.com
Mon Sep 12 15:12:26 CEST 2011
On Mon, Sep 12, 2011 at 8:35 PM, Mark Abraham <Mark.Abraham at anu.edu.au>wrote:
> On 12/09/2011 10:23 PM, lina wrote:
>> I am confused, why the job is running,
>> but they did not write the .edr, .log .xtc ... files.
>> Everything showed so normal, just not writing,
>> when I used thread, all is fine, the writing is normal.
>> just use mpi, I tried different nodes, still not work, now two hours
>> later, still no writing, just running.
> If you can run mdrun_threads -np 4 and get output and your mpirun -np 4
> mdrun_mpi does not write output, then there must be something wrong with
> your MPI environment. Try another MPI program and see what it does.
I guess I will drop an email to the administrator.
might be an MPI issue.
Thanks for your time,
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