[gmx-users] How do I examine the results didn't write issue

lina lina.lastname at gmail.com
Mon Sep 12 15:12:26 CEST 2011

On Mon, Sep 12, 2011 at 8:35 PM, Mark Abraham <Mark.Abraham at anu.edu.au>wrote:

> On 12/09/2011 10:23 PM, lina wrote:
>> Hi,
>> I am confused, why the job is running,
>> but they did not write the .edr, .log .xtc ... files.
>> Everything showed so normal, just not writing,
>> when I used thread, all is fine, the writing is normal.
>> just use mpi, I tried different nodes, still not work, now two hours
>> later, still no writing, just running.
> If you can run mdrun_threads -np 4 and get output and your mpirun -np 4
> mdrun_mpi does not write output, then there must be something wrong with
> your MPI environment. Try another MPI program and see what it does.

I guess I will drop an email to the administrator.

might be an MPI issue.

Thanks for your time,

> Mark
> --
> gmx-users mailing list    gmx-users at gromacs.org
> http://lists.gromacs.org/**mailman/listinfo/gmx-users<http://lists.gromacs.org/mailman/listinfo/gmx-users>
> Please search the archive at http://www.gromacs.org/**
> Support/Mailing_Lists/Search<http://www.gromacs.org/Support/Mailing_Lists/Search>before posting!
> Please don't post (un)subscribe requests to the list. Use the www interface
> or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/**Support/Mailing_Lists<http://www.gromacs.org/Support/Mailing_Lists>

Best Regards,

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20110912/5f715228/attachment.html>

More information about the gromacs.org_gmx-users mailing list