[gmx-users] simulation with amber10 and gromacs 4.5.1

[vijayaraj ramadoss]

Hello Users,

Previous I have done simulation of small protein using Amber10 with ff99sb force field. I did the same calculation using the gromacs 4.5.1 with amber ff99sb force field. I found a loop segment takes much more fluctuation with gromacs simulation and which was not observed with the amber10 simulation. can anyone explain me why this happens. 

regards,
vrk.
 		 	   		  
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