[gmx-users] Re: about non-writing issue
lina.lastname at gmail.com
Sun Sep 18 11:13:35 CEST 2011
It works now.
Not write (just based on guess) might
the md.log step such as is 11140000
while use thread I noticed the actually run step started from 11135000
so I run until it can write to the md.log
then switch to 1 node to run for a while,
then switch to more nodes.
But there might be some reason there which I don't know.
On Sun, Sep 18, 2011 at 4:35 PM, lina <lina.lastname at gmail.com> wrote:
> Very sporadically and also with high frequent,
> The job I submitted only running without writing (this job is not
> un-started one, mainly one I stopped and rerun).
> Before I thought I did not wait long enough, such as hours, but seriously
> after 3 or 8 hours, still running not writing.
> I ssh to each nodes, all is fully running.
> The storage is NFS, I/O flow can't be choked for hours.
> Really headache, sometimes it works.
> I have had no clue about it.
> Thanks for any suggestions,
> Best Regards,
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