[gmx-users] concentration distribution

[Justin A. Lemkul]

lina wrote:
> On Sep 25, 2011, at 0:33, raj <vvindv.vvindv at gmail.com> wrote:
> 
>> Hello,
>>
>> I would like to calculate the concentration distribution of atoms along the x and y axis from the trajectory. Can anybody suggest me a tool to calculate this?
> 
> g_rdf ?!
> 

g_rdf cannot produce independent distributions for different axes.  It can only 
produce 3-D RDF or lateral profiles (x/y) for interfacial systems.

g_density -d might accomplish something close, selecting the desired axes 
independently.

-Justin

>> regards,
>> Raj
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-- 
========================================

Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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