[gmx-users] pdb2gmx error

Justin A. Lemkul jalemkul at vt.edu
Mon Apr 2 02:54:05 CEST 2012

Acoot Brett wrote:
> Hi Mark,
> The fifth residue of Chain A is Asn, not Val. But Asn also no CG.

Standard nomenclature of ASN dictates that there is a CG atom in the side chain. 
  If your input file does not have this atom or it is named incorrectly, it will 
give rise to the error.



Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


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