[gmx-users] Re: do_dssp

[Mark Abraham]

On 5/04/2012 4:16 PM, bharat gupta wrote:
> Yes , I am using the correct options for dssp. But still I am getting 
> the same error.

What does invoking /usr/local/bin/dsspcmbi say?

Mark

>
> On Thu, Apr 5, 2012 at 2:12 PM, Mark Abraham <Mark.Abraham at anu.edu.au 
> <mailto:Mark.Abraham at anu.edu.au>> wrote:
>
>     On 5/04/2012 10:25 AM, bharat gupta wrote:
>
>         Hi,
>
>         I am trying to plot the ss content using the do_dssp command ,
>         but I am getting the following error :-
>
>         Failed to execute command: /usr/local/bin/dsspcmbi -na
>         ddldj5Bn ddXN9mH0 > /dev/null 2> /dev/null
>
>         I am using the DSSPold version. What could be the possible
>         reason for such an error ??
>
>
>     Many of them. Start by making sure you're following the advice of
>     do_dssp -h.
>
>     Mark
>
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> -- 
> Bharat
> Ph.D. Candidate
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