[gmx-users] micelle analysis

[priya thiyagarajan]

hello sir,

Thanks for your kind reply..

while  analysing the micelle formation, rdf calculation helps to find the
distribution of atoms..

to calculate the distribution of individual atoms, first i need to create
index group for my backbone atoms then i need to find the distribution of
atoms. am i correct?

if so how to create index group for oxygen atoms alone and nitrogen atoms
alone in my backbone?

also for reference group which group i need to select. can i select my
index group for both the  reference group and select group..

please help me with your answer.

Thanking you,
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