[gmx-users] micelle analysis

priya thiyagarajan priya.thiyagarajan09 at gmail.com
Tue Apr 17 06:18:56 CEST 2012

hello sir,

Thanks for your kind reply..

while  analysing the micelle formation, rdf calculation helps to find the
distribution of atoms..

to calculate the distribution of individual atoms, first i need to create
index group for my backbone atoms then i need to find the distribution of
atoms. am i correct?

if so how to create index group for oxygen atoms alone and nitrogen atoms
alone in my backbone?

also for reference group which group i need to select. can i select my
index group for both the  reference group and select group..

please help me with your answer.

Thanking you,
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