[gmx-users] Error- Atom not found in residue seq nr while adding atom
jcb1 at um.es
Wed Apr 18 12:14:50 CEST 2012
Your PDB structure have probably some missing atoms. Check if this is
the case for residue nr. 7.
To solve it you can use an external tool to process your PDB file adding
the missing atoms. I've used SwissPDB and worked fine.
El 18/04/12 11:24, aiswarya pawar escribió:
> Hi Users,
> I did the following step=
> pdb2gmx -ignh -f 1ahw.pdb -o sample.pdb -p sample.top
> and received an error= Atom ND1 not found in residue seq.nr
> <http://seq.nr>. 7 while adding atom.
> I dont understand how do i rectify this.
Javier CEREZO BASTIDA
Universidad de Murcia
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