[gmx-users] Fwd: Error: coordinate file does not match with the topology file
Mark.Abraham at anu.edu.au
Thu Apr 26 06:13:06 CEST 2012
Please do not make unsolicited general GROMACS inquiries to private
email addresses. The mailing lists exist for these kinds of purposes.
On point, you cannot be helped unless you provide the command lines that
you used and describe the objectives you were trying to achieve.
Whatever changes you make to one of the coordinate and .top file must be
matched in the other.
-------- Original Message --------
Subject: Error: coordinate file does not match with the topology file
Date: Wed, 25 Apr 2012 02:05:45 +0800 (SGT)
From: sonali shinde <shindesonali14 at yahoo.co.in>
Reply-To: sonali shinde <shindesonali14 at yahoo.co.in>
To: Mark.Abraham at anu.edu.au <mark.abraham at anu.edu.au>
----- Forwarded Message -----
*From:* sonali shinde <shindesonali14 at yahoo.co.in>
*To:* vini k <vineetha_mandlik at yahoo.co.in>
*Sent:* Monday, 23 April 2012 6:48 PM
*Subject:* Error: coordinate file does not match with the topology file
I am a user of gromacs 4.0 for molecular dynamic study of
a protein molecule. I have generated trajectory file before using the
same commands that I use now. Recently I am suffering some problem using
Gromacs , my coordinate file does not matches with the topology file.I
have attached the pdb file protein, .gro and .top file . I have
encountered same error a number of times with three different
proteins.Please suggest the answer for the same.
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