[gmx-users] DSSP-last GROMACS 4.5.7 can not use DSSP -please help to solve it

[Erik Marklund]

You set the environment variable DSSP to the absolute path to your dssp executable. Then do_sddp can make use of it. Is that clear?

Erik

26 apr 2012 kl. 09.33 skrev 李 麗花:

> Dear ALL:
> how to install DSSP in Gromacs4.5.7
> I followed someone replies mail still can not use 
> do I do right ?
> DSSP website-miscellaneous-distribution-dsspold-linux distribution then get "dsspcmbi"
> but 
> Gromacs can not recoginz this index 
> gromacs index is do_dssp ?
> and DSSP
> again , how to install DSSP in Gromacs ?
> many thanks 
> 
> Best Wishes
> li-hua
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-----------------------------------------------
Erik Marklund, PhD
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,    75124 Uppsala, Sweden
phone:    +46 18 471 6688        fax: +46 18 511 755
erikm at xray.bmc.uu.se
http://www2.icm.uu.se/molbio/elflab/index.html

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