[gmx-users] Re: GPCR MD Tutorial Using GROMACS (URL)

Bala S think_beyond at aol.com
Fri Apr 27 15:30:55 CEST 2012


Anirban,

Thank you. You guys are doing miracles with the biomolecules and solving
almost all of my problems.

I have followed your suggestion and could see now some more SOL molecules by
increasing the z value.

But I am seeing a substantial gap between the surface of the lipid bilayer
and added SOL molecules in the visualizer. Is it normal or I have to do
something about it?

Thanks
Bala S

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