[gmx-users] failed with intel compiler

Albert mailmd2011 at gmail.com
Sun Dec 9 17:30:47 CET 2012


Hello:

   I am compiling Gromacs4.6beta2 with intel cimpiler by command:

cmake .. -DGMX_MPI=ON 
-DCMAKE_CXX_COMPILER=/soft/intel64/icc/bin/intel64/mpiCC 
-DCMAKE_C_COMPILER=/soft/intel64/icc/bin/intel64/icc


But It fails with the following output:

    Change Dir: 
/home/albert/Downloads/gromacs/gromacs-4.6-beta2/build/CMakeFiles/CMakeTmp
   Run Build Command:/usr/bin/gmake "cmTryCompileExec/fast"
   /usr/bin/gmake -f CMakeFiles/cmTryCompileExec.dir/build.make
   CMakeFiles/cmTryCompileExec.dir/build
   gmake[1]: Entering directory
`/home/albert/Downloads/gromacs/gromacs-4.6-beta2/build/CMakeFiles/CMakeTmp'
   /usr/bin/cmake -E cmake_progress_report
/home/albert/Downloads/gromacs/gromacs-4.6-beta2/build/CMakeFiles/CMakeTmp/CMakeFiles
   1
   Building CXX object CMakeFiles/cmTryCompileExec.dir/testCXXCompiler.cxx.o
   /soft/intel64/icc/bin/intel64/mpiCC -o
   CMakeFiles/cmTryCompileExec.dir/testCXXCompiler.cxx.o -c
/home/albert/Downloads/gromacs/gromacs-4.6-beta2/build/CMakeFiles/CMakeTmp/testCXXCompiler.cxx
   catastrophic error: Compiler configuration problem encountered. The
   expected target architecture compiler is missing (11.1-intel64 !=
   12.1-intel64)
   (0): internal error: backend signals
   compilation aborted for
/home/albert/Downloads/gromacs/gromacs-4.6-beta2/build/CMakeFiles/CMakeTmp/testCXXCompiler.cxx
   (code 4)
   gmake[1]: Leaving directory
`/home/albert/Downloads/gromacs/gromacs-4.6-beta2/build/CMakeFiles/CMakeTmp
   gmake[1]: *** [CMakeFiles/cmTryCompileExec.dir/testCXXCompiler.cxx.o] 
Error
   4
   gmake: *** [cmTryCompileExec/fast] Error 2
   CMake will not be able to correctly generate this project.
Call Stack (most recent call first):
   CMakeLists.txt:157 (enable_language)
-- Configuring incomplete, errors occurred!




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