[gmx-users] Input vdwradii.dat file when using genbox

[Kieu Thu Nguyen]

Thank Justin !
But i am not clear "Is it read automatically when i put it in the working
directory or put it in

$GMXLIB ?".



The same question with gromos53a6_lipid.ff. To this new forefield, i put it
in $GMXLIB as the tutorial said.


Regards

KT


On Mon, Dec 17, 2012 at 10:17 AM, Justin Lemkul <jalemkul at vt.edu> wrote:

>
>
> On 12/16/12 10:15 PM, Kieu Thu Nguyen wrote:
>
>> Dear All,
>>
>> I am practising the tutorial 2 of Gromacs ( KALP-15 in DPPC). In the
>> step  "Solvate
>> with water",i made a copy of vdwradii.dat and changed the value of C from
>> 0.15 to 0.375. But i don't know how to input this changed file into
>> genbox.
>> I saw genbox -h, and i don't find any option for input file.dat.
>>
>>
> The file is read automatically.
>
> -Justin
>
> --
> ==============================**==========
>
> Justin A. Lemkul, Ph.D.
> Research Scientist
> Department of Biochemistry
> Virginia Tech
> Blacksburg, VA
> jalemkul[at]vt.edu | (540) 231-9080
> http://www.bevanlab.biochem.**vt.edu/Pages/Personal/justin<http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin>
>
> ==============================**==========
> --
> gmx-users mailing list    gmx-users at gromacs.org
> http://lists.gromacs.org/**mailman/listinfo/gmx-users<http://lists.gromacs.org/mailman/listinfo/gmx-users>
> * Please search the archive at http://www.gromacs.org/**
> Support/Mailing_Lists/Search<http://www.gromacs.org/Support/Mailing_Lists/Search>before posting!
> * Please don't post (un)subscribe requests to the list. Use the www
> interface or send it to gmx-users-request at gromacs.org.
> * Can't post? Read http://www.gromacs.org/**Support/Mailing_Lists<http://www.gromacs.org/Support/Mailing_Lists>
>