Sir,
I studying the dynamics of membrane proteins.First I did a 20 ns
simulation using GROMOS96 53a6.This force field cause some problems in the
helical part of the protein.Now I am trying to do the same simulation with
opls-aa force field.Is the changes I should have to do in ffnonbonded.itp
and ffbonded,itp is same as in the justin manual?