[gmx-users] reg. error

[Mark Abraham]

On 3/02/2012 3:54 PM, Vishwambhar Bhandare wrote:
> Hello,
> I am getting error given below,
> wht we can do for this?

Start by reading 
http://www.gromacs.org/Documentation/errors#Atom_X_in_residue_YYY_not_found_in_rtp_entry

Mark

>
>
> Program pdb2gmx, VERSION 4.5.4
> Source code file: /build/buildd/gromacs-4.5.4/src/kernel/pdb2gmx.c, 
> line: 655
>
> Fatal error:
> Atom 'H5T in residue A 1 was not found in rtp entry RA5 with 31 atoms
> while sorting atoms.
> .
>
> Thanks and Regards,
> --------------------------
> Vishwambhar
> Centre for Bioinformatics
> Pondicherry University
> Pondicherry
> --------------------------
>
>
>
>

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