[gmx-users] amber-lipid

[Steven Neumann]

Thank you!!!

On Mon, Feb 6, 2012 at 1:04 PM, Justin A. Lemkul <jalemkul at vt.edu> wrote:

>
>
> Алексей Раевский wrote:
>
>> Hi
>> Is it possible to use amber forcefield with lipid parameters like it
>> was done with gmx in "KALP-15 in DPPC" tutorial?
>> I have to use amber forcefield as it is neccessary for parametrization
>> of my ligand and its stecking interactions.
>>
>>
> If you can find suitable parameters for you lipids, then the workflow is
> likely similar, though you may not have to create any sort of hybrid force
> field if the atom types, bonded parameters, etc are taken from an existing
> Amber force field.
>
> -Justin
>
> --
> ==============================**==========
>
> Justin A. Lemkul
> Ph.D. Candidate
> ICTAS Doctoral Scholar
> MILES-IGERT Trainee
> Department of Biochemistry
> Virginia Tech
> Blacksburg, VA
> jalemkul[at]vt.edu | (540) 231-9080
> http://www.bevanlab.biochem.**vt.edu/Pages/Personal/justin<http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin>
>
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