[gmx-users] g_rdf

Justin A. Lemkul jalemkul at vt.edu
Tue Feb 7 16:21:58 CET 2012



Steven Neumann wrote:
> Hi Gmx Users,
>  
> I am interested in RDF of my protein resdiues away from the given point 
> in a range of 10 nm. g_rdf provides mi the data for app.5 nm. Is there 
> any chance to change it?
>  

The range of the RDF is determined by the box size.  You can use g_rdf -nopbc to 
get an RDF out to 3x the box length.

-Justin

-- 
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Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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