msnayeem at gmail.com
Fri Feb 24 15:17:39 CET 2012
I thought this time to be sufficient without any reasonable basis.
On Fri, Feb 24, 2012 at 7:40 PM, Justin A. Lemkul <jalemkul at vt.edu> wrote:
> shahid nayeem wrote:
>> My system is a protein-protein complex. After pulling I selected windows
>> at 0.1nm from an initial COM distance of 3.65nm to 5.7nm and thereafter
>> windows at 0.2nm spacing was selected upto 7.5nm. In each window 10ns MD
>> was done and g_wham command was run neglecting the fist 1ns run for
> OK, so how did you decide that 10 ns was sufficient in each window?
> Justin A. Lemkul
> Ph.D. Candidate
> ICTAS Doctoral Scholar
> MILES-IGERT Trainee
> Department of Biochemistry
> Virginia Tech
> Blacksburg, VA
> jalemkul[at]vt.edu | (540) 231-9080
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