[gmx-users] About g_msd. I want to plot the curve from 0.01ps.

Kiwoong Kim ilmarekw at gmail.com
Tue Jan 10 13:21:29 CET 2012


Hi

I have been learning how to use gromacs owing to your advice.

I have simple question on g_msd.
I tried to plot MSD curve using g_msd. I want to deeply investigate the MSD
curve from 0.01ps to the last of simulation (my case, 1ns).

However, g_msd always produce the MSD curve starting from 1ps.
How can I adjust the instance of starting time of MSD curve (for example,
0.01ps - 1ns)??

please help me.

Have a nice day!
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