[gmx-users] problem with gromacs

Sylwia Chmielewska sylwia.t.chmielewska at doctorate.put.poznan.pl
Thu Jan 12 16:28:19 CET 2012


Hello,

Thanks for your advice. I use "make distclean" before configure. But an error appeared in the same place.

cd gromacs-4.5.5

make distclean

./configure --disable-threads

make

.libs/xlate.o:xlate.c:(.text+0xa9b): undefined reference to `_put_symtab'
.libs/xlate.o:xlate.c:(.text+0xb3a): undefined reference to `_save_free'
.libs/xlate.o:xlate.c:(.text+0xba6): undefined reference to `_save_free'
.libs/xlate.o:xlate.c:(.text+0xc0d): undefined reference to `_save_free'
.libs/xlate.o:xlate.c:(.text+0xc6d): undefined reference to `_save_free'
.libs/xlate.o:xlate.c:(.text+0xc99): undefined reference to `_save_free'
collect2: ld returned 1 exit status
Makefile:459: recipe for target `libgmxpreprocess.la' failed
make[3]: *** [libgmxpreprocess.la] Error 1
make[3]: Leaving directory `/home/Sylwia/gromacs-4.5.5/src/kernel'
Makefile:302: recipe for target `all-recursive' failed
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory `/home/Sylwia/gromacs-4.5.5/src'
Makefile:238: recipe for target `all' failed
make[1]: *** [all] Error 2
make[1]: Leaving directory `/home/Sylwia/gromacs-4.5.5/src'
Makefile:347: recipe for target `all-recursive' failed
make: *** [all-recursive] Error 1

And what should I do, now?

Sylwia Chmielewska



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