[gmx-users] Coarse Grained Cytochrom C

XAvier Periole x.periole at rug.nl
Tue Jan 17 09:36:33 CET 2012

The Heme molecule is not available in the Martini web site. We have been working on a model but it won't be ready for release before some time. 

You could try to make you own model. 


On Jan 16, 2012, at 20:34, Dariush Mohammadyani <d.mohammadyani at gmail.com> wrote:

> Hi all,
> Has anybody used Coarse grained model for Cytochrome C? I could create a model using MARTINI forcefiels (using martinize.py script and 1HRC.pdb file), but it does not have HEM and HOH groups. Can anybody help me? 
> Kind Regards,
> Dariush Mohammadyani
> Department of Structural Biology
> University of Pittsburgh School of Medicine
> Biomedical Science Tower 3
> 3501 Fifth Avenue
> Pittsburgh, PA 15261
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