[gmx-users] walls

mohammad agha mra_bu at yahoo.com
Tue Jan 17 18:06:42 CET 2012

Dear Gromacs users,

May I ask you to help me about use of walls in martini coarse-grained, please?
I defined two walls for my system as following:
pbc        = xy         
nwall                      = 2
wall_type                = 12_6
wall_r_linpot            = 1
wall_atomtype         = W  W
I selected water as wall_atomtype, when I run grompp, all of things are good, but when I run mdrun, system give me: Segmentation fault
If I use pbc=xyz without walls, all of things are good, then my problem is wall.

May I know my mistake, please?

Best Regards
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