[gmx-users] Error in installation

[ahmet yıldırım]

Hi,

1.method:
You can install it from Synaptic package manager.
2.method:
sudo apt-get install libfftw3-dev
Later, in gromacs directory
./configure
sudo make
sudo make install
sudo make mdrun
sudo make links

2012/1/18 Mark Abraham <Mark.Abraham at anu.edu.au>

>  On 18/01/2012 7:30 PM, kumud agarwal wrote:
>
> Hi
>
> I have been trying to install Gromacs on ubuntu.
>
> After make command I got the following error
>
> */usr/bin/ld: /usr/local/lib/libfftw3f.a(alloc.o): relocation R_X86_64_32
> against `.rodata.str1.1' can not be used when making a shared object;
> recompile with -fPIC*
>
>
> See
> http://www.gromacs.org/Downloads/Installation_Instructions#Details_for_building_the_FFTW_prerequisite
>
> Mark
>
>  */usr/local/lib/libfftw3f.a: could not read symbols: Bad value*
>
> *collect2: ld returned 1 exit status*
>
> *make[3]: *** [libmd.la] Error 1*
>
> *make[3]: Leaving directory `/home/ankit/gromacs/gromacs-4.5.5/src/mdlib'*
>
> *make[2]: *** [all-recursive] Error 1*
>
> *make[2]: Leaving directory `/home/ankit/gromacs/gromacs-4.5.5/src'*
>
> *make[1]: *** [all] Error 2*
>
> *make[1]: Leaving directory `/home/ankit/gromacs/gromacs-4.5.5/src'*
>
> *make: *** [all-recursive] Error 1*
>
> *ankit at ubuntu:~/gromacs/gromacs-4.5.5$
> *
>
> How can I solve this error?
>
> Thanks
>
> Kumud Agarwal
>
>
>
>
>
>
>
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-- 
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