[gmx-users] gromacs installtion error

venkatesh s svenkateshbioinformatics at gmail.com
Wed Jan 25 16:16:58 CET 2012

       I am facing problem:--> installation of gromacs i got that following
(Note: i run the root only, previously i installed fftw )
Kindly any one give me a opt answer

/usr/bin/ld: /usr/local/lib/libfftw3f.a(mapflags.o): relocation R_X86_64_32
against `.rodata' can not be used when making a shared object; recompile
with -fPIC
/usr/local/lib/libfftw3f.a: could not read symbols: Bad value
collect2: ld returned 1 exit status
make[3]: *** [libmd.la] Error 1
make[3]: Leaving directory `/home/student/Desktop/gromacs-4.5.5/src/mdlib'
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory `/home/student/Desktop/gromacs-4.5.5/src'
make[1]: *** [all] Error 2
make[1]: Leaving directory `/home/student/Desktop/gromacs-4.5.5/src'
make: *** [all-recursive] Error 1

Thanks in Advance

II M.Sc Bioinformatics,
Alagappa University,
Tamil Nadu,
svenkateshbioinformatics at gmail.com
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20120125/60f59b91/attachment.html>

More information about the gromacs.org_gmx-users mailing list