[gmx-users] isodensity surface

[Justin A. Lemkul]

Nidhi Katyal wrote:
> Thank you for your reply.I was able to create isodensity surface but can 
> i  color my protein surface according to the difference in flexibility 
> of the backbone caused by addition of some molecule and also know 
> addition of which molecules.Please help.
> 

There are various coloring options in all the visualization programs.  Consult 
the documentation for those; this is not a Gromacs problem and thus if you have 
difficulty, your best course of action is to ask for help in the appropriate forum.

-Justin

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Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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