[gmx-users] trajectory analysis
turgaycakmak34 at gmail.com
Tue Jun 5 10:40:19 CEST 2012
I would like to get information about *pi-pi stacking*, *van der
and hydrophobic interactions* for my system (several-peptides in a box
filled with water). Can Gromacs compute these interactions?
As far as I see from mailing-list, to get information on *hydrophobic
interactions*, g_mindist and g_sas can be used. But, they look very
different. Which one should be used?
I would deeply appreciate your response.
My best regards,
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