[gmx-users] Regarding error.

Erik Marklund erikm at xray.bmc.uu.se
Wed Jun 6 10:20:13 CEST 2012

I use MacroMolecular Builder for all sorts of things, including filling in missing atoms.


6 jun 2012 kl. 08.59 skrev Javier Cerezo:

> There is no GROMACS tool that repairs incomplete structures, but you can find other programs that can do it. Some of them have been previously posted in this list (try a search on it). Personally I've used Swiss PDB viewer, which is useful to add missing atoms.
> Javier
> El 06/06/12 07:42, Seera Suryanarayana escribió:
>> Dear all gromacs users,
>>                                   I have 1VZV.pdb file, in that file HIS231 has incomplete ring as N atom is missing.Can i add N atom to the .pdb file if possible how can i add that atom to .pdb file.
>> Suryanarayana Seera,
>> PhD student,
>> India.
> -- 
> gmx-users mailing list    gmx-users at gromacs.org
> http://lists.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
> Please don't post (un)subscribe requests to the list. Use the 
> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/Support/Mailing_Lists

Erik Marklund, PhD
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,    75124 Uppsala, Sweden
phone:    +46 18 471 6688        fax: +46 18 511 755
erikm at xray.bmc.uu.se

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20120606/b197082a/attachment.html>

More information about the gromacs.org_gmx-users mailing list