[gmx-users] How to compare two pdb files

[delara aghaie]

Dear Justin
Thanks
That really helped me : )
Regards
Delara



________________________________
 From: Justin A. Lemkul <jalemkul at vt.edu>
To: delara aghaie <d_aghaie at yahoo.com>; Discussion list for GROMACS users <gmx-users at gromacs.org> 
Sent: Saturday, 16 June 2012, 17:54
Subject: Re: [gmx-users] How to compare two pdb files
 


On 6/16/12 9:19 AM, delara aghaie wrote:
> Dear Justin
> Thanks for your explanation, but the problem is when the results are printed out
> on screen, we can see only the end part of it, as the window does not let us to
> see the whole output. Is there any way to solve this?
>
>

Redirect the shell output into a file, i.e.

gmxcheck -s1 file1.tpr -s2 file2.tpr > diff.txt

Alternatively, pipe the output through the 'more' command

gmxcheck -s1 file1.tpr -s2 file2.tpr | more

-Justin

-- 
========================================

Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

========================================
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20120616/2cdcc362/attachment.html>