[gmx-users] Trjconv error

Shima Arasteh shima_arasteh2001 at yahoo.com
Tue Jun 19 08:13:16 CEST 2012

Dear gmx users,

I want to follow the workflow regarding to
for the second step I enter the command as below:
trjconv -f mdwhole.xtc -s md.tpr -dump 0 -o 1stframe.pdb

But I get the error:
 Index[232] 235 is larger than the number of atoms in the
trajectory file (234). There is a mismatch in the contents
of your -f, -s and/or -n files

I don't have any index file, so what this error is talking about? How may I solve it? Anybody may suggest me any solution please?

 I would be so thankful for your suggestions.

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