[gmx-users] (no subject)

Justin A. Lemkul jalemkul at vt.edu
Tue Jun 19 15:01:18 CEST 2012

On 6/19/12 8:58 AM, ankita oindrila wrote:
>   I am doing simulation of membrane protein in lipid bilayer for my
> college project!.
>   After making the  complex of protein and lipid bilayer,   I was going
> to  the step using  genbox  to  solvate the system.
> The error that i am now getting is :
> Fatal error:
> Not enough memory. Failed to realloc 1008588696 bytes for nlist->jjnr,
> nlist->jjnr=0x20026008
> (called from file ns.c, line 537)
> what should i do??

If you need nearly 1 GB to solvate a system, it must be incredibly large. 
Consult the following:




Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


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