[gmx-users] Regarding pdb file of a polymer

sreeta.g sreetasai at gmail.com
Tue Jun 19 21:17:57 CEST 2012

I am working with Polyvinyl Alcohol polymer. I have been following
(procedure by Justin) this thread for a lot of guidance. I have obtained the
coordinate file for PVA from other sources, however, I am unable to
understand how the coordinate file was written in this format. All other
sources of pdb files for polymers contain a fixed number of atoms and the
entire chain is written in the coordinate file.
Please direct me on this as to how the pdb file mentioned in the link has
been created.

Sreeta Gorripaty
University of Toronto
Summer exchange student

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