[gmx-users] wrong distances with g_dist
kovalskyy at uthscsa.edu
Tue Jun 26 23:14:31 CEST 2012
I try to calculate distance between two atoms with g_dist. Somewhat I get
distance lower than actual.
Here there are coordinates of the two atoms (PDB format)
ATOM 702 CZ ARG X 45 5.930 9.230 41.740 0.00 0.00
ATOM 2751 CA PHE X 177 41.710 45.000 27.180 0.00 0.00
And the distance I get from g_dist is 4.6260725 nm while the actual is 5.265
What the problem can be?
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