[gmx-users] FW: Problem installing Gromacs: What next?
Suhaila Haji Mohd Hussin
bell_beauty12 at hotmail.com
Tue Mar 20 03:14:54 CET 2012
Hello.
I tried the following
export CPPFLAGS="-I/home/joe/programs/fftw/include"
export LDFLAGS="-L/home/joe/programs/fftw/lib"then
./configure --with-fft=fftw3
And it still gives me the same error
configure: error: Cannot find fftw3f library.
Please help :(
Suhaila
> Date: Sun, 18 Mar 2012 14:28:11 -0400
> From: jalemkul at vt.edu
> To: gmx-users at gromacs.org
> Subject: Re: [gmx-users] FW: Problem installing Gromacs: What next?
>
>
> Please be sure to keep the discussion on the mailing list and not my personal email.
>
> You may need to specify the location of the fftw installation using LDFLAGS and
> CPPFLAGS for the libraries and headers, respectively. See example usage at:
>
> http://www.gromacs.org/Documentation/Installation_Instructions#Using_autoconf
>
> -Justin
>
> Suhaila Haji Mohd Hussin wrote:
> >
> > > Date: Sun, 18 Mar 2012 14:13:29 -0400
> > > From: jalemkul at vt.edu
> > > To: gmx-users at gromacs.org
> > > Subject: Re: [gmx-users] FW: Problem installing Gromacs: What next?
> > >
> > >
> > >
> > > Suhaila Haji Mohd Hussin wrote:
> > > > OK. I downloaded Gromacs 4.5.5. Unpacked it then type
> > > >
> > > > ./configure
> > > >
> > > > configure: error: Cannot find fftw3f library
> > > >
> > > > But I already install fftw3 properly.
> > > >
> > > > What is happening?
> > > >
> > >
> > > The commands below will install double-precision fftw, but Gromacs is
> > single
> > > precision by default. The precisions must match. The proper commands
> > for fftw
> > > in this case (as noted on
> > >
> > http://www.gromacs.org/Documentation/Installation_Instructions#Details_for_building_the_FFTW_prerequisite)
> >
> > > would be:
> > >
> > > ./configure --enable-float
> > > make
> > > make install
> > >
> > > -Justin
> > >
> > > > Cheers,
> > > > Suhaila.
> > > >
> > > > From: bell_beauty12 at hotmail.com
> > > > To: gmx-users at gromacs.org
> > > > Subject: Problem installing Gromacs: What next?
> > > > Date: Mon, 19 Mar 2012 05:53:20 +1200
> > > >
> > > > Hello.
> > > >
> > > > I already installed fftw3. After unpacking it, I install via the
> > following:
> > > >
> > > > ./configure
> > > > make
> > > > make install
> > > >
> > > >
> > > > But after that the instructions are not clear to me. Like, it's not
> > > > telling where do I download Gromacs tar?
> > > > Or do I need to type some command from fftw so that Gromacs should
> > > > automatically built?
> > > >
> > > > I'm so confused. The instructions for beginners are very vague &
> > > > frustrating.
> > > >
> > > > Please help,
> > > > Suhaila.
> > > >
> > > >
> > >
> > > --
> > > ========================================
> > >
> > > Justin A. Lemkul
> > > Ph.D. Candidate
> > > ICTAS Doctoral Scholar
> > > MILES-IGERT Trainee
> > > Department of Biochemistry
> > > Virginia Tech
> > > Blacksburg, VA
> > > jalemkul[at]vt.edu | (540) 231-9080
> > > http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
> > >
> > > ========================================
> > > --
> > > gmx-users mailing list gmx-users at gromacs.org
> > > http://lists.gromacs.org/mailman/listinfo/gmx-users
> > > Please search the archive at
> > http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
> > > Please don't post (un)subscribe requests to the list. Use the
> > > www interface or send it to gmx-users-request at gromacs.org.
> > > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
> >
> > It's still giving me the same error :(
> >
> > Suhaila.
> >
>
> --
> ========================================
>
> Justin A. Lemkul
> Ph.D. Candidate
> ICTAS Doctoral Scholar
> MILES-IGERT Trainee
> Department of Biochemistry
> Virginia Tech
> Blacksburg, VA
> jalemkul[at]vt.edu | (540) 231-9080
> http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
>
> ========================================
> --
> gmx-users mailing list gmx-users at gromacs.org
> http://lists.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
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> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
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