[gmx-users] About Distance.pl script

[Justin A. Lemkul]

Dariush Mohammadyani wrote:
> I have gotten this error previously. I changed the address of the g_dist 
> (e.g. /user/gromacs/bin/g_dist) in distances.pl <http://distances.pl> 
> file and it works.
>  

Yes, the script assumes the command g_dist exists in your $PATH and is 
unmodified (no prefixes or suffixes).  If this is not the case you will have to 
modify the script so that your executable is called.

-Justin

> Dariush
> 
> On Thu, Mar 29, 2012 at 11:51 AM, vidhya sankar <scvsankar_agr at yahoo.com 
> <mailto:scvsankar_agr at yahoo.com>> wrote:
> 
>     Dear justin , Thank you for your previous reply
>     When i Download and  run Distance.pl script In your website I got
>     the following error
> 
> 
>     readline() on closed filehandle IN at ./Distance.pl line 16.
>     Use of uninitialized value $distance in concatenation (.) or string
>     at ./Distance.pl line 30.
> 
>     How to rectify this error ?
>     Thanks in Advance
>     With regards
>     S.Vidhyasankar
> 
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-- 
========================================

Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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