[gmx-users] About the function of "-v' in mdrun

Peter C. Lai pcl at uab.edu
Fri Mar 30 01:24:24 CEST 2012


It's almost always a good idea to run with -v because it will output basic 
state information and time-to-completion estimates as your simulation runs. 
It prints to "standard out" so if launching mdrun from a script (like on a 
cluster), make sure the script captures the output to a file.

I find the data that -v outputs to be more useful in general than the extra
details found in the .log file.

On 2012-03-29 04:10:03PM -0700, Acoot Brett wrote:
> Dear All,
> 
> There is a tutorial says the function of "-v" in mdrun is to make the md process visible in the screen, which is correct.
> 
> However from the introduction of mdrun in the new version of gromacs, it says the function of "-v" is to make "noisy and loud".
> 
> Will you please tell me what is the meaning of "noisy and loud" here?
> 
> I am looking forward to getting your reply.
> 
> Cheers,
> 
> Acoot

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