[gmx-users] Re: do_dssp error

Mark Abraham Mark.Abraham at anu.edu.au
Fri Mar 30 14:56:23 CEST 2012


On 30/03/2012 10:28 PM, Erik Marklund wrote:
> And I replied "What's your dssp version? The most recent ones have 
> different flags that are not yet supported by gromacs."
>

... and I asked whether you'd read and followed the advice in do_dssp 
-h. Asking for more help without appearing to have used that you've 
already received doesn't show much respect for the time people have 
already given. Where's their incentive to keep helping you? :-)

Mark

> Erik
>
> 30 mar 2012 kl. 13.23 skrev Albert:
>
>> Hello:
>>  there is some problem for my do_dssp, it always claimed:
>>
>> Program do_dssp_d, VERSION 4.5.5
>> Source code file: do_dssp.c, line: 572
>> Fatal error:
>> Failed to execute command: /usr/local/bin/dssp -na ddg1g7Id ddRwthIi 
>> > /dev/null 2> /dev/null
>>
>>
>> someone suggest to compile gromacs with double precision and I 
>> recompiled it with --enable-double
>> but it still doesn't work.....
>>
>> does anybody else have any suggestions?
>>
>> THX
>> -- 
>> gmx-users mailing list gmx-users at gromacs.org 
>> <mailto:gmx-users at gromacs.org>
>> http://lists.gromacs.org/mailman/listinfo/gmx-users
>> Please search the archive at 
>> http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
>> Please don't post (un)subscribe requests to the list. Use the www 
>> interface or send it to gmx-users-request at gromacs.org.
>> Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
> -----------------------------------------------
> Erik Marklund, PhD
> Dept. of Cell and Molecular Biology, Uppsala University.
> Husargatan 3, Box 596,    75124 Uppsala, Sweden
> phone:    +46 18 471 6688        fax: +46 18 511 755
> erikm at xray.bmc.uu.se <mailto:erikm at xray.bmc.uu.se>
> http://www2.icm.uu.se/molbio/elflab/index.html
>
>
>

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20120330/7285e1f9/attachment.html>


More information about the gromacs.org_gmx-users mailing list